Publications

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1. Electro-agriculture: Revolutionizing farming for a sustainable future.
   Crandall, Harland-Dunaway, Jinkerson†, Jiao†
   Joule, 8:1-18. (2024) 📄
   Covered by: WashU; EurekAlert; Vertical Farm Daily;
2. Biosynthesis of chlorophyll c in a dinoflagellate and heterologous production in planta.
   Jinkerson†, Poveda-Huertes, Cooney, Cho, Ochoa-Fernandez, Keeling, Xiang†, Andersen-Ranberg
   Current Biology, 34:1-12. (2024) 📄
   Covered by: UCR; SynBioBeta; New Atlas;
3. Optimized genome-wide CRISPR screening enables rapid engineering of growth-based phenotypes in Yarrowia lipolytica.
   Robertson, Trivedi, Lupish, Ramesh, Aguilar, Carrera, Lee, Arteaga, Nguyen, Lenert-Mondou, Harland-Dunaway, Jinkerson, Wheeldon
   Metabolic Engineering, 86:55-65. (2024) 📄
4. Cathepsin X is a conserved cell death protein involved in algal response to environmental stress.
   Mizrachi, Sadeh, Ben-Dor, Dym, Ku, Feldmesser, Zarfin, Brunson, Allen, Jinkerson, Schatz, Vardi
   bioRxiv, doi:10.1101/2024.05.15.594278. (2024)
5. Engineering bacterial warriors: harnessing microbes to modulate animal physiology.
   Gao, Ruiz, Case, Jinkerson, Sun
   Current Opinion in Biotechnology, 87:103113. (2024) 📄
6. Multi-omics analysis of green lineage osmotic stress pathways unveils crucial roles of different cellular compartments.
   Vilarrasa-Blasi, Vellosillo, Jinkerson, Fauser, Xiang, Minkoff, Wang, Kniazev, Guzman, Osaki, Barrett-Wilt, Sussman, Jonikas, Dinneny
   Nature Communications, 15:1-16. (2024) 📄
7. Chloroplast methyltransferase homolog RMT2 is involved in photosystem I biogenesis.
   Kim, Huang, Findinier, Bunbury, Redekop, Shrestha, Vilarrasa-Blasi, Jinkerson, Fakhimi, Fauser, Jonikas, Onishi, Xu, Grossman
   bioRxiv, doi:10.1101/2023.12.21.572672. (2023)
8. Alternative carbon sources for the production of plant cellular agriculture: a case study on acetate.
   Hann, Harland-Dunaway, Garcia, Meuser†, Jinkerson†
   Frontiers in Plant Science, 14:1104751. (2023) 📄
9. Generation of Symbiodiniaceae mutants using UV mutagenesis.
   Russo, Xiang†, Jinkerson†
   STAR Protocols, 4:1-13. (2023) 📄
10. Cell wall digestion of the dinoflagellate Breviolum minutum.
    Pairs, Dundon, Narváez-Vásquez, Orozco-Cárdenas, Xiang, Jinkerson, Rao
    Journal of Applied Phycology, doi:10.1007/s10811-023-03140-7. (2023) 📄
11. DNA delivery by high aspect ratio nanomaterials to algal chloroplasts.
    Newkirk, Jeon, Kim, Sivaraj, De Allende, Castillo, Jinkerson†, Giraldo†
    Environmental Science: Nano, 10:2890-2903. (2023) 📄
12. A hybrid inorganic–biological artificial photosynthesis system for energy-efficient food production.
    Hann*, Overa*, Harland-Dunaway*, Narvaez, Le, Orozco-Cárdenas, Jiao†, Jinkerson†
    Nature Food, 3:461-471. (2022) 📄
    Perspective by: Wang & Gong. Nature Food, 3:409–410 (2022)
    Covered by: UCR; UDel; National Geographic; Wired; Anthropocene; Science & Vie; Agri-Pulse; SciShow;
13. Systematic characterization of gene function in the photosynthetic alga Chlamydomonas reinhardtii.
    Fauser*, Vilarrasa-Blasi*, Onishi, Ramundo, Patena, Millican, Osaki, Philp, Nemeth, Salomé, Li, Wakao, Kim, Kaye, Grossman, Niyogi, Merchant, Cutler, Walter, Dinneny†, Jonikas†, Jinkerson†
    Nature Genetics, 54:705–714. (2022) 📄 💾
    Covered by: UCR; Carnegie Science; SciTech Daily;
14. Cnidarian-Symbiodiniaceae symbiosis establishment is independent of photosynthesis.
    Jinkerson†*, Russo*, Newkirk, Kirk, Chi, Martindale, Grossman, Hatta, Xiang†
    Current Biology, 32:1-14. (2022) 📄
    Covered by: UCR; UF; UNCC; ZME Science; Cell press curated collection;
15. Engineered nanoceria alleviates thermally-induced oxidative stress in free-living Breviolum minutum (Symbiodiniaceae, formerly Clade B).
    Roger, Russo, Jinkerson, Giraldo, Lewinski
    Frontiers in Marine Science, 9:960173. (2022) 📄
    Covered by: Science Journal for Kids; Blackboard tutorial from Science Journal for Kids;
16. Nanotechnology approaches for chloroplast biotechnology advancements.
    Newkirk, De Allende, Jinkerson, Giraldo
    Frontiers in Plant Science, doi:10.3389/fpls.2021.691295. (2021) 📄
17. Vision, challenges and opportunities for a Plant Cell Atlas.
    Plant Cell Atlas Consortium et al.
    eLife, 10:e6687. (2021) 📄
18. Symbiont population control by host-symbiont metabolic interaction in Symbiodiniaceae-cnidarian associations.
    Xiang, Lehnert, Jinkerson, Clowez, Kim, DeNofrio, Pringle, Grossman
    Nature Communications, 11:108. (2020) 📄
    Covered by: Phys.org;
19. A peek in the micro-sized world: a review of design principles, engineering tools, and applications of engineered microbial community.
    Gao, Sabnis, Costantini, Jinkerson, Sun
    Biochemical Society Transactions, 48:399-409. (2020) 📄
20. A genome-wide algal mutant library reveals a global view of genes required for eukaryotic photosynthesis.
    Li, Patena, Fauser, Jinkerson, Saroussi, Ivanova, Robertson, Yue, Zhang, Vilarrasa-Blasi, Wittkopp, Ramundo, Blum, Goh, Laudon, Lefebvre, Grossman, Jonikas
    Nature Genetics, 1:1-12. (2019) 📄
    Covered by: Princeton; EurekAlert!; Technology Networks;
21. Glucose-induced trophic shift in an endosymbiont dinoflagellate with physiological and molecular consequences.
    Xiang, Jinkerson, Clowez, Tran, Krediet, Onishi, Cleves, Pringle, Grossman
    Plant Physiology, 176:1793-1807. (2018) 📄
    Highlighted in: Plant Physiology
22. Modulation of medium-chain fatty acid synthesis in Synechococcus sp. PCC 7002 by replacing FabH with a Chaetoceros ketoacyl-ACP synthase.
    Gu, Jinkerson, Davies, Sisson, Schneider, Posewitz
    Frontiers in Plant Science, 7:690. (2016) 📄
23. Effectiveness of cationically modified cellulose polymers for dewatering algae.
    Liberatore, Peterson, Nottoli, McCulloch, Jinkerson, Boyle, Posewitz
    Separation Science and Technology, 51:892-898. (2016)
24. Molecular techniques to interrogate and edit the Chlamydomonas nuclear genome.
    Jinkerson and Jonikas
    The Plant Journal, 82:393-412. (2015) 📄
25. A fluorescence‐activated cell sorting-based strategy for rapid isolation of high-lipid Chlamydomonas mutants.
    Terashima, Freeman, Jinkerson, Jonikas
    The Plant Journal, 81:147-159. (2015)
26. Ultrastructure and composition of the Nannochloropsis gaditana cell wall.
    Scholz, Weiss, Jinkerson, Jing, Roth, Goodenough, Posewitz, Gerken
    Eukaryotic Cell, 13:1450-1464. (2014)
27. Evolutionary and biotechnological implications of robust hydrogenase activity in halophilic strains of Tetraselmis.
    D’Adamo, Jinkerson, Boyd, Brown, Baxter, Peters, Posewitz
    PLoS ONE, 9:e85812. (2014)
28. Draft genome sequence of the filamentous cyanobacterium Leptolyngbya Heron Island strain J exhibiting chromatic acclimation.
    Paul, Jinkerson, Buss, Steel, Mohr, Hess, Chen, Fromme
    Genome Announcement, 2:e01166-13. (2014)
29. Towards a photosynthetic microbial platform for terpenoid engineering.
    Davies, Jinkerson, Posewitz
    Photosynthesis Research, 123:265-284. (2014)
30. Genomic insights from the oleaginous model alga Nannochloropsis gaditana.
    Jinkerson, Radakovits, Posewitz
    Bioengineered, 4:37-43. (2013) 📄
31. Biocommodities from photosynthetic microorganisms.
    Work, Bentley, Scholz, D’Adamo, Gu, Vogler, Franks, Stanish, Jinkerson, Posewitz
    Environmental Progress & Sustainable Energy, 32:989-1001. (2013)
32. Draft genome sequence and transformation of the oleaginous alga Nannochloropsis gaditana.
    Radakovits*, Jinkerson*, Fuerstenberg, Tae, Settlage, Boore, Posewitz
    Nature Communications, 3:686. (2012) (* equal contribution)
33. Improving photosynthesis and metabolic networks for the competitive production of phototroph-derived biofuels.
    Work, D’Adamo, Radakovits, Jinkerson, Posewitz
    Current Opinion in Biotechnology, 23:290-297. (2012)
34. Genetic disruption of both Chlamydomonas reinhardtii [FeFe]-hydrogenases: insight into the role of HYDA2 in H2 production.
    Meuser, D’Adamo, Jinkerson, Mus, Yang, Ghirardi, Seibert, Grossman, Posewitz
    Biochemical and Biophysical Research Communications, 417:704-709. (2012)
35. Improving biofuel production in phototrophic microorganisms with systems biology tools.
    Jinkerson, Subramanian, Posewitz
    Biofuels, 2:125-144. (2011) 📄
36. The production of the sesquiterpene β-caryophyllene in a transgenic strain of the cyanobacterium Synechocystis.
    Reinsvold, Jinkerson, Radakovits, Posewitz, Basu
    Journal of Plant Physiology, 168:848-852. (2011)
37. Increased lipid accumulation in the Chlamydomonas reinhardtii sta7-10 starchless isoamylase mutant and increased carbohydrate synthesis in complemented strains.
    Work*, Radakovits*, Jinkerson*, Meuser, Elliott, Vinyard, Laurens, Dismukes, Posewitz
    Eukaryotic Cell, 9:1251-1261. (2010) (* equal contribution)
38. Genetic engineering of algae for enhanced biofuel production.
    Radakovits, Jinkerson, Darzins, Posewitz
    Eukaryotic Cell, 9:486-501. (2010)